EnhancerDB
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  3. rs2471600[chr12:46948089]
Enhancers that have rs2471600[chr12:46948089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2471600[chr12:46948089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46948077 46948091 POU1F1 JASPAR yes 120637136
chr12 46948077 46948095 SRF JASPAR yes 120637137
chr12 46948079 46948090 PHOX2A JASPAR yes 120637138
chr12 46948079 46948090 PROP1 JASPAR yes 120637139
Genes associated with rs2471600[chr12:46948089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More