EnhancerDB
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  3. rs2476563[chr1:178626306]
Enhancers that have rs2476563[chr1:178626306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2476563[chr1:178626306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178625563 178626444 ZNF274 GTRD no Liver (HepG2) 21352845
chr1 178625569 178626347 ZNF274 GTRD no Liver (HepG2) 21352846
chr1 178625614 178626342 ZNF274 GTRD no Liver (HepG2) 21352847
chr1 178625664 178626386 ZNF274 GTRD no Liver (HepG2) 21352849
chr1 178626293 178626306 NFKB1 JASPAR yes 33434550
chr1 178626293 178626306 NFKB2 JASPAR yes 33434551
chr1 178626296 178626307 CEBPB JASPAR yes 33434552
chr1 178626296 178626308 HLF JASPAR yes 33434553
chr1 178626297 178626308 CEBPA JASPAR yes 33434554
chr1 178626304 178626308 YY1 TRANSFAC yes 33434555
Genes associated with rs2476563[chr1:178626306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More