EnhancerDB
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  3. rs2476564[chr1:178626340]
Enhancers that have rs2476564[chr1:178626340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2476564[chr1:178626340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178625563 178626444 ZNF274 GTRD no Liver (HepG2) 21352845
chr1 178625569 178626347 ZNF274 GTRD no Liver (HepG2) 21352846
chr1 178625614 178626342 ZNF274 GTRD no Liver (HepG2) 21352847
chr1 178625664 178626386 ZNF274 GTRD no Liver (HepG2) 21352849
chr1 178626328 178626341 NR2F1 JASPAR yes 33434556
chr1 178626330 178626345 JUND JASPAR yes 33434557
chr1 178626331 178626344 JUN JASPAR yes 33434558
chr1 178626332 178626340 CREB1 JASPAR yes 33434559
Genes associated with rs2476564[chr1:178626340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More