EnhancerDB
  1. Home
  2. SNP
  3. rs2488539[chr1:53884589]
Enhancers that have rs2488539[chr1:53884589]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs2488539[chr1:53884589]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53884569 53884589 RREB1 JASPAR yes 28930908
chr1 53884571 53884591 RREB1 JASPAR yes 28930909
chr1 53884573 53884593 RREB1 JASPAR yes 28930910
chr1 53884575 53884595 RREB1 JASPAR yes 28930911
chr1 53884577 53884597 RREB1 JASPAR yes 28930912
chr1 53884585 53884597 INSM1 JASPAR yes 28930913
Genes associated with rs2488539[chr1:53884589], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More