EnhancerDB
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  3. rs2490261[chr1:207477469]
Enhancers that have rs2490261[chr1:207477469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207468191 207488755 enh12602
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2490261[chr1:207477469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207477036 207477599 ZNF143 GTRD no Epithelial (MCF-7) 21373596
chr1 207477151 207477580 ZNF143 GTRD no Epithelial (MCF-7) 21373597
chr1 207477175 207477675 ZNF143 GTRD no Epithelial (MCF-7) 21373598
chr1 207477469 207477483 GATA2 JASPAR yes 34854840
Genes associated with rs2490261[chr1:207477469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More