EnhancerDB
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  3. rs2517491[chr6:31038338]
Enhancers that have rs2517491[chr6:31038338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 31022954 31045508 enh38944
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs2517491[chr6:31038338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 31038327 31038340 POU3F3 JASPAR yes 101071068
chr6 31038328 31038340 POU3F1 JASPAR yes 101071069
chr6 31038328 31038341 POU2F2 JASPAR yes 101071070
chr6 31038329 31038338 POU3F4 JASPAR yes 101071072
chr6 31038329 31038340 FOXB1 JASPAR yes 101071073
chr6 31038332 31038347 FOXA1 JASPAR yes 101071074
chr6 31038333 31038344 FOXB1 JASPAR yes 101071075
chr6 31038333 31038344 FOXC1 JASPAR yes 101071076
chr6 31038333 31038345 FOXC2 JASPAR yes 101071077
chr6 31038334 31038346 FOXI1 JASPAR yes 101071078
chr6 31038335 31038339 TEAD2 TRANSFAC yes 101071079
chr6 31038335 31038340 TBP TRANSFAC yes 101071080
chr6 31038336 31038344 FOXG1 JASPAR yes 101071081
Genes associated with rs2517491[chr6:31038338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More