EnhancerDB
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Enhancers that have rs255002[chr16:15578263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 15573928 15593521 enh31710
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs255002[chr16:15578263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 15572960 15578441 ZNF274 GTRD no Bone Marrow (K562) 21693500
chr16 15572960 15578441 ZNF274 GTRD no Bone Marrow (K562) 108184268
chr16 15573016 15578632 ZNF274 GTRD no Bone Marrow (K562) 21693501
chr16 15573016 15578632 ZNF274 GTRD no Bone Marrow (K562) 108184269
chr16 15574638 15578281 ZNF274 GTRD no Liver (HepG2) 21693502
chr16 15574638 15578281 ZNF274 GTRD no Liver (HepG2) 108184270
chr16 15575048 15578597 ZNF274 GTRD no Bone Marrow (K562) 21693505
chr16 15575048 15578597 ZNF274 GTRD no Bone Marrow (K562) 108184273
chr16 15575085 15578720 ZNF274 GTRD no Bone Marrow (K562) 21693507
chr16 15575085 15578720 ZNF274 GTRD no Bone Marrow (K562) 108184275
chr16 15575119 15578319 ZNF274 GTRD no Bone Marrow (K562) 21693510
chr16 15575119 15578319 ZNF274 GTRD no Bone Marrow (K562) 108184278
chr16 15575516 15578492 ZNF143 GTRD no Epithelial (MCF-7) 21693526
chr16 15575516 15578492 ZNF143 GTRD no Epithelial (MCF-7) 108184294
chr16 15575649 15578357 ZNF274 GTRD no Bone Marrow (K562) 21693530
chr16 15575649 15578357 ZNF274 GTRD no Bone Marrow (K562) 108184298
chr16 15578261 15578276 FOXP1 JASPAR yes 9728749
chr16 15578263 15578278 FOXP1 JASPAR yes 9728750
Genes associated with rs255002[chr16:15578263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More