EnhancerDB
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  3. rs2560761[chr6:13455147]
Enhancers that have rs2560761[chr6:13455147]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13451065 13468999 enh8964
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2560761[chr6:13455147]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13454797 13455221 CTCF UCSC Txn Factor no Conserved 108538603
chr6 13454883 13455147 RAD21 UCSC Txn Factor no Conserved 108538604
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538605
chr6 13454949 13455541 GATA2 UCSC Txn Factor no Conserved 108538606
chr6 13455138 13455150 POU3F1 JASPAR yes 100033605
chr6 13455138 13455151 POU3F3 JASPAR yes 100033606
chr6 13455140 13455149 POU5F1B JASPAR yes 100033607
chr6 13455142 13455161 CTCF JASPAR yes 100033608
Genes associated with rs2560761[chr6:13455147], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More