EnhancerDB
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  3. rs2571222[chr18:55463027]
Enhancers that have rs2571222[chr18:55463027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2571222[chr18:55463027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55463013 55463027 MTF1 JASPAR yes 110887402
chr18 55463018 55463029 CEBPB JASPAR yes 110887403
chr18 55463018 55463038 TBX19 JASPAR yes 110887404
chr18 55463019 55463029 CEBPB JASPAR yes 110887405
chr18 55463019 55463029 CEBPD JASPAR yes 110887406
chr18 55463019 55463029 CEBPE JASPAR yes 110887407
chr18 55463019 55463029 CEBPG JASPAR yes 110887408
chr18 55463019 55463030 CEBPA JASPAR yes 110887409
chr18 55463026 55463041 SOX21 JASPAR yes 110887410
Genes associated with rs2571222[chr18:55463027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More