EnhancerDB
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  3. rs2574839[chr17:75421838]
Enhancers that have rs2574839[chr17:75421838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2574839[chr17:75421838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75421030 75422317 ZNF143 GTRD no Epithelial (MCF-7) 21790651
chr17 75421030 75422317 ZNF143 GTRD no Epithelial (MCF-7) 108299004
chr17 75421827 75421839 ZBTB7B JASPAR yes 56080900
chr17 75421830 75421840 ZNF740 JASPAR yes 56080901
chr17 75421831 75421851 RREB1 JASPAR yes 56080902
chr17 75421833 75421853 RREB1 JASPAR yes 56080903
Genes associated with rs2574839[chr17:75421838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More