EnhancerDB
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  3. rs2586505[chr17:48296582]
Enhancers that have rs2586505[chr17:48296582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2586505[chr17:48296582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48296066 48296606 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21769700
chr17 48296562 48296582 RREB1 JASPAR yes 54688484
chr17 48296566 48296587 IRF1 JASPAR yes 54688487
chr17 48296567 48296587 RREB1 JASPAR yes 54688488
chr17 48296568 48296583 IRF9 JASPAR yes 54688489
chr17 48296568 48296588 RREB1 JASPAR yes 54688490
chr17 48296569 48296583 IRF7 JASPAR yes 54688491
chr17 48296570 48296582 IRF1 JASPAR yes 54688492
chr17 48296571 48296583 IRF1 JASPAR yes 54688493
chr17 48296571 48296586 RUNX2 JASPAR yes 54688494
chr17 48296579 48296589 ZNF740 JASPAR yes 54688495
chr17 48296579 48296600 ZNF263 JASPAR yes 54688496
chr17 48296580 48296590 SP1 JASPAR yes 54688497
chr17 48296580 48296590 ZNF740 JASPAR yes 54688498
chr17 48296581 48296591 ZNF740 JASPAR yes 54688499
Genes associated with rs2586505[chr17:48296582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 47572655 47592379 + NGFR ENSG00000064300.4 47572655 704203 Liver 0.472152 16015