EnhancerDB
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  3. rs260510[chr1:2185159]
Enhancers that have rs260510[chr1:2185159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs260510[chr1:2185159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2185149 2185162 TFAP2A JASPAR yes 26227340
chr1 2185149 2185162 TFAP2B JASPAR yes 26227341
chr1 2185149 2185162 TFAP2C JASPAR yes 26227342
chr1 2185157 2185162 SP1 TRANSFAC yes 26227343
Genes associated with rs260510[chr1:2185159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More