EnhancerDB
  1. Home
  2. SNP
  3. rs260511[chr1:2184401]
Enhancers that have rs260511[chr1:2184401]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs260511[chr1:2184401]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2184400 2184409 SNAI2 JASPAR yes 26227276
chr1 2184400 2184410 ID4 JASPAR yes 26227277
chr1 2184400 2184410 TCF3 JASPAR yes 26227278
chr1 2184400 2184410 TCF4 JASPAR yes 26227279
Genes associated with rs260511[chr1:2184401], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More