EnhancerDB
  1. Home
  2. SNP
  3. rs2640563[chr12:56455252]
Enhancers that have rs2640563[chr12:56455252]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs2640563[chr12:56455252]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56455246 56455256 NKX2-3 JASPAR yes 121089789
chr12 56455247 56455256 NKX2-8 JASPAR yes 121089790
chr12 56455252 56455273 REST JASPAR yes 121089791
Genes associated with rs2640563[chr12:56455252], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 56631591 56652175 - ANKRD52 ENSG00000139645.9 56652175 176339 Esophagus 0.270469 12208