EnhancerDB
  1. Home
  2. SNP
  3. rs2640828[chr17:30887000]
Enhancers that have rs2640828[chr17:30887000]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 30876099 30888642 enh4363
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2640828[chr17:30887000]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 30886991 30887004 ZBTB18 JASPAR yes 53890519
chr17 30886993 30887003 ID4 JASPAR yes 53890520
chr17 30886993 30887003 TCF3 JASPAR yes 53890521
chr17 30886993 30887003 TCF4 JASPAR yes 53890522
chr17 30886995 30887004 ZEB1 JASPAR yes 53890523
chr17 30886996 30887004 TBX5 JASPAR yes 53890524
Genes associated with rs2640828[chr17:30887000], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More