EnhancerDB
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  3. rs2642468[chr6:107162707]
Enhancers that have rs2642468[chr6:107162707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2642468[chr6:107162707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107162697 107162715 MAFF JASPAR yes 104060631
chr6 107162698 107162713 MAFK JASPAR yes 104060632
chr6 107162705 107162715 POU6F2 JASPAR yes 104060633
chr6 107162706 107162716 EMX1 JASPAR yes 104060634
chr6 107162706 107162716 EMX2 JASPAR yes 104060635
chr6 107162706 107162716 EVX1 JASPAR yes 104060636
chr6 107162706 107162716 EVX2 JASPAR yes 104060637
chr6 107162706 107162716 HESX1 JASPAR yes 104060638
chr6 107162706 107162716 HOXA2 JASPAR yes 104060639
chr6 107162706 107162716 HOXB2 JASPAR yes 104060640
chr6 107162706 107162716 LHX2 JASPAR yes 104060641
chr6 107162706 107162716 LHX6 JASPAR yes 104060642
chr6 107162706 107162716 MEOX1 JASPAR yes 104060643
chr6 107162706 107162716 MEOX2 JASPAR yes 104060644
chr6 107162706 107162716 NOTO JASPAR yes 104060645
chr6 107162707 107162715 LBX1 JASPAR yes 104060646
chr6 107162707 107162715 PDX1 JASPAR yes 104060647
chr6 107162707 107162715 VAX1 JASPAR yes 104060648
chr6 107162707 107162715 VAX2 JASPAR yes 104060649
chr6 107162707 107162715 VSX1 JASPAR yes 104060650
chr6 107162707 107162715 VSX2 JASPAR yes 104060651
Genes associated with rs2642468[chr6:107162707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More