EnhancerDB
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  3. rs2646954[chr18:53666778]
Enhancers that have rs2646954[chr18:53666778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 53662065 53669555 enh17726
Brain (SK-N-SH) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs2646954[chr18:53666778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 53666772 53666778 NFIC JASPAR yes 110812743
chr18 53666773 53666783 HESX1 JASPAR yes 110812744
chr18 53666774 53666778 H1TF2 TRANSFAC yes 110812745
chr18 53666774 53666778 NFE TRANSFAC yes 110812746
chr18 53666774 53666778 SRF TRANSFAC yes 110812747
chr18 53666774 53666782 DLX6 JASPAR yes 110812748
chr18 53666774 53666782 MSX2 JASPAR yes 110812749
chr18 53666775 53666786 NFIL3 JASPAR yes 110812750
chr18 53666776 53666788 DBP JASPAR yes 110812751
chr18 53666776 53666788 HLF JASPAR yes 110812752
chr18 53666776 53666788 TEF JASPAR yes 110812753
chr18 53666778 53666789 NFIL3 JASPAR yes 110812754
Genes associated with rs2646954[chr18:53666778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More