EnhancerDB
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  3. rs2657561[chr1:225878851]
Enhancers that have rs2657561[chr1:225878851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2657561[chr1:225878851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225876718 225879499 AR GTRD no Prostate (PC-3) 21385240
chr1 225877302 225878958 ZNF143 GTRD no Epithelial (MCF-7) 21385248
chr1 225877413 225879411 ZNF143 GTRD no Epithelial (MCF-7) 21385252
chr1 225877422 225878862 ZNF143 GTRD no Epithelial (MCF-7) 21385253
chr1 225877427 225879225 ZNF274 GTRD no Liver (HepG2) 21385254
chr1 225877482 225879354 ZNF274 GTRD no Liver (HepG2) 21385259
chr1 225878075 225878857 ZNF274 GTRD no Liver (HepG2) 21385279
chr1 225878113 225878869 ZNF274 GTRD no Liver (HepG2) 21385280
chr1 225878841 225878853 YY1 JASPAR yes 35762150
chr1 225878844 225878856 E2F1 JASPAR yes 35762152
Genes associated with rs2657561[chr1:225878851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More