EnhancerDB
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  3. rs2658678[chr12:95728244]
Enhancers that have rs2658678[chr12:95728244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95726252 95768135 enh2529
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs2658678[chr12:95728244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95728238 95728251 SMAD2 JASPAR yes 122986437
chr12 95728241 95728501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21566951
Genes associated with rs2658678[chr12:95728244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 96252706 96297606 + SNRPF ENSG00000139343.6 96252706 524462 Spleen 0.227576 12421