EnhancerDB
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  3. rs2673960[chr1:235018400]
Enhancers that have rs2673960[chr1:235018400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2673960[chr1:235018400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 21399330
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883399
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883400
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883401
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883402
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 21399384
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883412
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883413
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883414
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883415
chr1 235016955 235018839 P63 GTRD no Skin (Keratinocyte) 21399819
chr1 235016955 235018839 P63 GTRD no Skin (Keratinocyte) 107883943
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 21399820
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 107883944
chr1 235017006 235018816 ZBTB33 GTRD no Lung (A549) 107883946
chr1 235017054 235019961 ZNF274 GTRD no Blood (GM12878) 21399822
chr1 235017054 235019961 ZNF274 GTRD no Blood (GM12878) 107883947
chr1 235017501 235018847 P63 GTRD no Skin (Keratinocyte) 21399825
chr1 235017566 235018550 P63 GTRD no Skin (Keratinocyte) 21399829
chr1 235017578 235018700 ZNF274 GTRD no Cervix (HeLa-S3) 21399830
chr1 235017631 235018686 ZNF274 GTRD no Bone Marrow (K562) 21399831
chr1 235017645 235018410 ZNF274 GTRD no Liver (HepG2) 21399832
chr1 235017646 235018948 ZNF274 GTRD no Cervix (HeLa-S3) 21399834
chr1 235017660 235018674 ZNF274 GTRD no Liver (HepG2) 21399837
chr1 235017741 235018779 ZNF143 GTRD no Epithelial (MCF-7) 21399840
chr1 235017761 235018686 P63 GTRD no Skin (Keratinocyte) 21399841
chr1 235017808 235018643 ZNF274 GTRD no Liver (HepG2) 21399843
chr1 235017810 235018750 ZNF274 GTRD no Blood (GM12878) 21399845
chr1 235017827 235018852 ZNF274 GTRD no Liver (HepG2) 21399848
chr1 235017950 235018878 ZNF274 GTRD no Cervix (HeLa-S3) 21399869
chr1 235017966 235018548 ZNF274 GTRD no Blood (GM12878) 21399871
chr1 235018002 235018573 ZNF274 GTRD no Cervix (HeLa-S3) 21399874
chr1 235018017 235018669 ZNF274 GTRD no Cervix (HeLa-S3) 21399875
chr1 235018017 235018676 ZNF274 GTRD no Cervix (HeLa-S3) 21399876
chr1 235018019 235018894 ZNF274 GTRD no Cervix (HeLa-S3) 21399877
chr1 235018020 235018619 ZNF274 GTRD no Bone Marrow (K562) 21399878
chr1 235018043 235018584 ZNF274 GTRD no Cervix (HeLa-S3) 21399880
chr1 235018066 235018446 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21399881
chr1 235018085 235018651 ZNF274 GTRD no Cervix (HeLa-S3) 21399882
chr1 235018119 235018737 ZNF274 GTRD no Bone Marrow (K562) 21399883
chr1 235018122 235018647 MYOD GTRD no Muscle (Myoblast) 21399884
chr1 235018124 235018714 ZNF274 GTRD no Bone Marrow (K562) 21399885
chr1 235018129 235018546 ZNF274 GTRD no Cervix (HeLa-S3) 21399887
chr1 235018131 235018681 ZNF274 GTRD no Cervix (HeLa-S3) 21399888
chr1 235018133 235018560 ZNF143 GTRD no Epithelial (MCF-7) 21399889
chr1 235018133 235018583 ZNF274 GTRD no Liver (HepG2) 21399890
chr1 235018134 235018459 ZNF274 GTRD no Cervix (HeLa-S3) 21399891
chr1 235018158 235018770 ZNF143 GTRD no Epithelial (MCF-7) 21399892
chr1 235018163 235018763 ZNF274 GTRD no Cervix (HeLa-S3) 21399893
chr1 235018167 235018651 ZNF143 GTRD no Epithelial (MCF-7) 21399894
chr1 235018173 235018635 ZNF274 GTRD no Bone Marrow (K562) 21399895
chr1 235018204 235018564 ZNF274 GTRD no Bone Marrow (K562) 21399896
chr1 235018233 235018615 ZNF274 GTRD no Cervix (HeLa-S3) 21399897
chr1 235018259 235018579 ZNF274 GTRD no Bone Marrow (K562) 21399898
chr1 235018305 235018605 ZNF143 GTRD no Epithelial (MCF-7) 21399899
chr1 235018399 235018407 EHF JASPAR yes 36325405
Genes associated with rs2673960[chr1:235018400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More