EnhancerDB
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  3. rs2673965[chr1:235029554]
Enhancers that have rs2673965[chr1:235029554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2673965[chr1:235029554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235029337 235029687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400035
chr1 235029368 235029888 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400036
chr1 235029384 235029980 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400037
chr1 235029437 235029837 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400038
chr1 235029452 235029892 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400039
chr1 235029480 235029850 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400040
chr1 235029495 235029891 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400041
chr1 235029498 235029781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400042
chr1 235029512 235029882 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400043
chr1 235029518 235029848 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400044
chr1 235029532 235029812 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21400045
chr1 235029546 235029558 BHLHE23 JASPAR yes 36326872
chr1 235029547 235029557 BHLHE22 JASPAR yes 36326873
chr1 235029547 235029557 NEUROD2 JASPAR yes 36326874
chr1 235029547 235029557 NEUROG2 JASPAR yes 36326875
chr1 235029547 235029557 OLIG1 JASPAR yes 36326876
chr1 235029547 235029557 OLIG2 JASPAR yes 36326877
chr1 235029547 235029557 OLIG3 JASPAR yes 36326878
chr1 235029554 235029918 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21400046
Genes associated with rs2673965[chr1:235029554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More