EnhancerDB
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  3. rs2673971[chr1:235030809]
Enhancers that have rs2673971[chr1:235030809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2673971[chr1:235030809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235030153 235030978 ZNF274 GTRD no Blood (GM12878) 21400059
chr1 235030155 235030876 ZNF274 GTRD no Blood (GM12878) 21400060
chr1 235030156 235030882 ZNF274 GTRD no Blood (GM12878) 21400061
chr1 235030168 235030882 ZNF274 GTRD no Blood (GM12878) 21400063
chr1 235030170 235031064 ZNF274 GTRD no Blood (GM12878) 21400064
chr1 235030180 235030835 ZNF274 GTRD no Blood (GM12878) 21400066
chr1 235030253 235030880 ZNF274 GTRD no Blood (GM12878) 21400067
chr1 235030279 235031015 ZNF274 GTRD no Liver (HepG2) 21400068
chr1 235030293 235030838 ZNF274 GTRD no Blood (GM12878) 21400070
chr1 235030293 235031411 ZNF274 GTRD no Liver (HepG2) 21400071
chr1 235030357 235030842 ZNF274 GTRD no Blood (GM12878) 21400074
chr1 235030387 235030944 ZNF274 GTRD no Liver (HepG2) 21400076
chr1 235030436 235030995 ZNF274 GTRD no Liver (HepG2) 21400077
chr1 235030451 235030897 ZNF274 GTRD no Liver (HepG2) 21400078
chr1 235030453 235031570 ZNF274 GTRD no Liver (HepG2) 21400079
chr1 235030498 235030873 ZNF274 GTRD no Liver (HepG2) 21400081
chr1 235030602 235030989 ZNF274 GTRD no Bone Marrow (K562) 21400082
chr1 235030805 235030814 NKX3-2 JASPAR yes 36327106
chr1 235030805 235030815 NKX2-3 JASPAR yes 36327107
chr1 235030806 235030814 ISL2 JASPAR yes 36327108
chr1 235030806 235030815 NKX2-8 JASPAR yes 36327109
Genes associated with rs2673971[chr1:235030809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More