EnhancerDB
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  3. rs2680707[chr17:56455641]
Enhancers that have rs2680707[chr17:56455641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56450725 56479661 enh4499
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2)
Transcript factors that have rs2680707[chr17:56455641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56455626 56455641 MEF2C JASPAR yes 55015219
chr17 56455637 56455643 GATA3 JASPAR yes 55015221
Genes associated with rs2680707[chr17:56455641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56429861 56494956 - RNF43 ENSG00000108375.8 56494956 0 Lung 2.93468e-12 16088