EnhancerDB
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  3. rs2682306[chr12:53270407]
Enhancers that have rs2682306[chr12:53270407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 53270322 53270511 vista13494
VISTA
Transcript factors that have rs2682306[chr12:53270407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 21547904
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034746
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034747
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 21547905
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034748
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034749
chr12 53270120 53271058 ZNF274 GTRD no Bone Marrow (K562) 21547957
chr12 53270120 53271058 ZNF274 GTRD no Bone Marrow (K562) 108034797
chr12 53270165 53270629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547958
chr12 53270165 53270629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034798
chr12 53270214 53270610 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547959
chr12 53270214 53270610 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034799
chr12 53270235 53270605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547960
chr12 53270235 53270605 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034800
chr12 53270258 53270568 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21547961
chr12 53270258 53270568 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034801
chr12 53270274 53270534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547962
chr12 53270274 53270534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034802
chr12 53270398 53270418 ESR1 JASPAR yes 82408223
chr12 53270398 53270418 ESR1 JASPAR yes 120957997
chr12 53270401 53270419 ESR2 JASPAR yes 82408224
chr12 53270401 53270419 ESR2 JASPAR yes 120957998
chr12 53270403 53270418 ESR2 JASPAR yes 82408225
chr12 53270403 53270418 ESR2 JASPAR yes 120957999
chr12 53270403 53270423 ESR1 JASPAR yes 82408226
chr12 53270403 53270423 ESR1 JASPAR yes 120958000
chr12 53270404 53270408 LFA1 TRANSFAC yes 82408227
chr12 53270404 53270408 LFA1 TRANSFAC yes 120958001
Genes associated with rs2682306[chr12:53270407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More