EnhancerDB
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  3. rs2682307[chr12:53270131]
Enhancers that have rs2682307[chr12:53270131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2682307[chr12:53270131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53267559 53270146 ZNF143 GTRD no Epithelial (MCF-7) 21547749
chr12 53267559 53270146 ZNF143 GTRD no Epithelial (MCF-7) 108034519
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 21547904
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034746
chr12 53268065 53270761 ZNF274 GTRD no Bone Marrow (K562) 108034747
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 21547905
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034748
chr12 53268065 53270802 ZNF274 GTRD no Bone Marrow (K562) 108034749
chr12 53269363 53270244 ZNF274 GTRD no Bone Marrow (K562) 21547954
chr12 53270120 53271058 ZNF274 GTRD no Bone Marrow (K562) 21547957
chr12 53270120 53271058 ZNF274 GTRD no Bone Marrow (K562) 108034797
chr12 53270129 53270149 RREB1 JASPAR yes 120957970
Genes associated with rs2682307[chr12:53270131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More