EnhancerDB
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  3. rs2700143[chr12:67987187]
Enhancers that have rs2700143[chr12:67987187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 67982265 67991415 enh14800
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2700143[chr12:67987187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 67986800 67987370 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21553837
chr12 67986919 67987415 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21553838
chr12 67987178 67987188 HOXA13 JASPAR yes 121598998
chr12 67987178 67987188 HOXB13 JASPAR yes 121598999
chr12 67987178 67987189 HOXA10 JASPAR yes 121599000
chr12 67987179 67987188 CDX1 JASPAR yes 121599001
chr12 67987179 67987190 CDX2 JASPAR yes 121599002
chr12 67987179 67987190 RUNX1 JASPAR yes 121599003
chr12 67987180 67987198 IRF2 JASPAR yes 121599004
chr12 67987181 67987202 IRF1 JASPAR yes 121599005
chr12 67987183 67987198 PRDM1 JASPAR yes 121599006
chr12 67987183 67987198 STAT2 JASPAR yes 121599007
chr12 67987184 67987198 STAT1 JASPAR yes 121599008
chr12 67987185 67987199 IRF7 JASPAR yes 121599009
chr12 67987185 67987199 IRF8 JASPAR yes 121599010
chr12 67987185 67987200 IRF9 JASPAR yes 121599011
Genes associated with rs2700143[chr12:67987187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More