EnhancerDB
  1. Home
  2. SNP
  3. rs2725240[chr4:89074004]
Enhancers that have rs2725240[chr4:89074004]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89060585 89074375 enh21674
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2725240[chr4:89074004]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89073997 89074006 NKX2-8 JASPAR yes 91155096
chr4 89073997 89074007 NKX2-3 JASPAR yes 91155097
chr4 89074003 89074013 GSC2 JASPAR yes 91155098
chr4 89074003 89074013 GSC JASPAR yes 91155099
chr4 89074004 89074012 OTX1 JASPAR yes 91155100
chr4 89074004 89074013 PITX3 JASPAR yes 91155101
Genes associated with rs2725240[chr4:89074004], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More