EnhancerDB
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  3. rs2727088[chr15:66114244]
Enhancers that have rs2727088[chr15:66114244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 66108745 66135935 enh16247
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2727088[chr15:66114244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 66114238 66114244 NFIC JASPAR yes 24109535
chr15 66114240 66114244 H1TF2 TRANSFAC yes 24109536
chr15 66114240 66114244 NFE TRANSFAC yes 24109537
chr15 66114240 66114244 SRF TRANSFAC yes 24109538
chr15 66114244 66114259 NR2C2 JASPAR yes 24109539
Genes associated with rs2727088[chr15:66114244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 65950384 66084631 - DENND4A ENSG00000174485.10 66084631 29613 Breast 0.46713 14039