EnhancerDB
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  3. rs2739507[chr1:231527329]
Enhancers that have rs2739507[chr1:231527329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2739507[chr1:231527329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231527321 231527331 HOXA13 JASPAR yes 36088334
chr1 231527321 231527331 HOXB13 JASPAR yes 36088335
chr1 231527321 231527331 HOXD13 JASPAR yes 36088336
chr1 231527321 231527332 HOXA10 JASPAR yes 36088337
chr1 231527322 231527331 CDX1 JASPAR yes 36088338
chr1 231527322 231527332 MNX1 JASPAR yes 36088339
chr1 231527322 231527333 CDX2 JASPAR yes 36088340
Genes associated with rs2739507[chr1:231527329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More