EnhancerDB
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  3. rs2749706[chr1:231527170]
Enhancers that have rs2749706[chr1:231527170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2749706[chr1:231527170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231527161 231527174 NFKB1 JASPAR yes 36088299
chr1 231527161 231527174 NFKB2 JASPAR yes 36088300
chr1 231527162 231527172 NFKB1 JASPAR yes 36088301
chr1 231527162 231527172 RELA JASPAR yes 36088302
chr1 231527162 231527173 NFKB1 JASPAR yes 36088303
chr1 231527163 231527173 RELA JASPAR yes 36088304
chr1 231527166 231527180 EBF1 JASPAR yes 36088305
Genes associated with rs2749706[chr1:231527170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More