EnhancerDB
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  3. rs2749709[chr1:231530476]
Enhancers that have rs2749709[chr1:231530476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2749709[chr1:231530476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231530475 231530482 NKX3-1 JASPAR yes 36088886
chr1 231530476 231530484 FOXC1 JASPAR yes 36088887
Genes associated with rs2749709[chr1:231530476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More