EnhancerDB
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  3. rs2768551[chr6:109270656]
Enhancers that have rs2768551[chr6:109270656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109261225 109272035 enh23485
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2768551[chr6:109270656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109270652 109270661 SRY JASPAR yes 104217728
chr6 109270654 109270669 HNF1A JASPAR yes 104217729
chr6 109270655 109270671 POU4F2 JASPAR yes 104217730
chr6 109270655 109270671 POU4F3 JASPAR yes 104217731
chr6 109270656 109270666 PAX3 JASPAR yes 104217732
chr6 109270656 109270666 PAX7 JASPAR yes 104217733
Genes associated with rs2768551[chr6:109270656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More