EnhancerDB
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  3. rs2788123[chr1:212091859]
Enhancers that have rs2788123[chr1:212091859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs2788123[chr1:212091859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212091337 212091953 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377571
chr1 212091596 212092217 ZNF274 GTRD no Cervix (HeLa-S3) 21377575
chr1 212091767 212092182 ZNF274 GTRD no Bone Marrow (K562) 21377576
chr1 212091769 212092045 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377577
chr1 212091807 212092053 ZNF274 GTRD no Liver (HepG2) 21377578
chr1 212091811 212092051 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377579
chr1 212091853 212091862 SOX9 JASPAR yes 35091242
Genes associated with rs2788123[chr1:212091859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More