EnhancerDB
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  3. rs2789546[chr1:112143899]
Enhancers that have rs2789546[chr1:112143899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112128419 112151455 enh566
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs2789546[chr1:112143899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112143381 112143911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329457
chr1 112143381 112143911 NFIC UCSC Txn Factor no Conserved 107822365
chr1 112143381 112143911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822366
chr1 112143395 112143985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329458
chr1 112143395 112143985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822367
chr1 112143395 112144185 IKZF1 UCSC Txn Factor no Conserved 107822368
chr1 112143415 112143915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329460
chr1 112143415 112143915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822370
chr1 112143431 112144008 RELA UCSC Txn Factor no Conserved 107822376
chr1 112143453 112143949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329471
chr1 112143453 112143949 RUNX3 UCSC Txn Factor no Conserved 107822386
chr1 112143453 112143949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822387
chr1 112143532 112143916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329483
chr1 112143532 112143916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822401
chr1 112143557 112143993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329487
chr1 112143557 112143993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822405
chr1 112143573 112143983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329488
chr1 112143573 112143983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822406
chr1 112143595 112144185 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329491
chr1 112143595 112144185 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107822409
Genes associated with rs2789546[chr1:112143899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More