EnhancerDB
  1. Home
  2. SNP
  3. rs2790878[chr1:231534390]
Enhancers that have rs2790878[chr1:231534390]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2790878[chr1:231534390]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231534387 231534392 GATA2 JASPAR yes 36089523
chr1 231534388 231534394 ZNF354C JASPAR yes 36089524
Genes associated with rs2790878[chr1:231534390], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More