EnhancerDB
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  3. rs2790884[chr1:231531932]
Enhancers that have rs2790884[chr1:231531932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 231531776 231531955 vista5525
VISTA
Transcript factors that have rs2790884[chr1:231531932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231531359 231531935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21392101
chr1 231531359 231531935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107879313
chr1 231531359 231531935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107879314
chr1 231531697 231532720 ZNF274 GTRD no Bone Marrow (K562) 107879320
chr1 231531851 231532510 ZNF274 GTRD no Bone Marrow (K562) 107879321
chr1 231531852 231532546 ZNF274 GTRD no Bone Marrow (K562) 107879322
chr1 231531901 231532500 ZNF143 GTRD no Epithelial (MCF-7) 21392104
chr1 231531901 231532500 ZNF143 GTRD no Epithelial (MCF-7) 107879323
chr1 231531901 231532502 ZNF143 GTRD no Epithelial (MCF-7) 21392105
chr1 231531901 231532502 ZNF143 GTRD no Epithelial (MCF-7) 107879324
chr1 231531915 231532456 ZNF274 GTRD no Bone Marrow (K562) 107879325
chr1 231531927 231531938 FOXH1 JASPAR yes 36089150
chr1 231531927 231531938 FOXH1 JASPAR yes 118479449
Genes associated with rs2790884[chr1:231531932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More