EnhancerDB
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  3. rs2794394[chr1:225888437]
Enhancers that have rs2794394[chr1:225888437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2794394[chr1:225888437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225887906 225888502 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21385509
chr1 225888041 225888437 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385529
chr1 225888105 225888722 ZNF143 GTRD no Epithelial (MCF-7) 21385536
chr1 225888107 225888921 ZNF274 GTRD no Liver (HepG2) 21385537
chr1 225888121 225888814 ZNF274 GTRD no Liver (HepG2) 21385539
chr1 225888123 225888443 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385540
chr1 225888132 225888662 ZNF274 GTRD no Liver (HepG2) 21385542
chr1 225888144 225888448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385543
chr1 225888175 225888811 ZNF274 GTRD no Liver (HepG2) 21385544
chr1 225888188 225888737 ZNF274 GTRD no Liver (HepG2) 21385545
chr1 225888195 225888763 ZNF274 GTRD no Liver (HepG2) 21385546
chr1 225888215 225888806 ZNF274 GTRD no Liver (HepG2) 21385547
chr1 225888225 225889008 ZNF274 GTRD no Liver (HepG2) 21385548
chr1 225888241 225888720 ZNF274 GTRD no Liver (HepG2) 21385549
chr1 225888258 225888698 ZNF143 GTRD no Epithelial (MCF-7) 21385550
chr1 225888262 225888719 ZNF274 GTRD no Liver (HepG2) 21385551
chr1 225888268 225888756 ZNF274 GTRD no Liver (HepG2) 21385552
chr1 225888272 225888618 ZNF274 GTRD no Liver (HepG2) 21385553
chr1 225888280 225888624 ZNF143 GTRD no Epithelial (MCF-7) 21385554
chr1 225888316 225889154 ZNF274 GTRD no Liver (HepG2) 21385555
chr1 225888332 225888715 ZNF143 GTRD no Epithelial (MCF-7) 21385556
chr1 225888344 225888721 ZNF143 GTRD no Epithelial (MCF-7) 21385557
chr1 225888437 225888452 MEF2C JASPAR yes 35763560
Genes associated with rs2794394[chr1:225888437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More