EnhancerDB
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  3. rs2794398[chr1:225886130]
Enhancers that have rs2794398[chr1:225886130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2794398[chr1:225886130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225885934 225886239 ZNF143 GTRD no Epithelial (MCF-7) 21385444
chr1 225885977 225886211 ZNF274 GTRD no Cervix (HeLa-S3) 21385445
chr1 225886000 225886822 ZNF274 GTRD no Liver (HepG2) 21385446
chr1 225886005 225886602 ZNF274 GTRD no Liver (HepG2) 21385447
chr1 225886011 225886776 ZNF274 GTRD no Liver (HepG2) 21385448
chr1 225886033 225887411 ZNF274 GTRD no Liver (HepG2) 21385449
chr1 225886043 225887445 ZNF143 GTRD no Epithelial (MCF-7) 21385450
chr1 225886046 225886693 ZNF274 GTRD no Liver (HepG2) 21385451
chr1 225886048 225886628 ZNF274 GTRD no Liver (HepG2) 21385452
chr1 225886052 225886703 ZNF274 GTRD no Liver (HepG2) 21385453
chr1 225886056 225886811 ZNF274 GTRD no Liver (HepG2) 21385454
chr1 225886063 225886672 ZNF274 GTRD no Liver (HepG2) 21385455
chr1 225886081 225886824 ZNF143 GTRD no Epithelial (MCF-7) 21385456
chr1 225886098 225886767 ZNF143 GTRD no Epithelial (MCF-7) 21385457
chr1 225886100 225886827 ZNF143 GTRD no Epithelial (MCF-7) 21385458
chr1 225886104 225886640 ZNF274 GTRD no Liver (HepG2) 21385459
chr1 225886120 225886740 ZNF274 GTRD no Liver (HepG2) 21385460
chr1 225886123 225886131 NR4A2 JASPAR yes 35763191
chr1 225886123 225886136 EOMES JASPAR yes 35763192
chr1 225886123 225886686 ZNF143 GTRD no Epithelial (MCF-7) 21385461
chr1 225886126 225886136 SREBF1 JASPAR yes 35763193
chr1 225886126 225886136 SREBF2 JASPAR yes 35763194
chr1 225886127 225886135 MGA JASPAR yes 35763195
chr1 225886130 225886646 ZNF274 GTRD no Liver (HepG2) 21385462
Genes associated with rs2794398[chr1:225886130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More