EnhancerDB
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  3. rs2808599[chr1:231533482]
Enhancers that have rs2808599[chr1:231533482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2808599[chr1:231533482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231533473 231533483 PAX7 JASPAR yes 36089377
chr1 231533477 231533490 POU3F3 JASPAR yes 36089378
chr1 231533478 231533490 POU2F1 JASPAR yes 36089379
chr1 231533478 231533490 TEAD1 JASPAR yes 36089380
Genes associated with rs2808599[chr1:231533482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More