EnhancerDB
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  3. rs2811936[chr1:23880822]
Enhancers that have rs2811936[chr1:23880822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2811936[chr1:23880822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802423
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802424
chr1 23880812 23880827 TFAP2C JASPAR yes 27441288
chr1 23880815 23880826 TFAP2A JASPAR yes 27441290
chr1 23880815 23880826 TFAP2B JASPAR yes 27441291
chr1 23880815 23880826 TFAP2C JASPAR yes 27441292
chr1 23880816 23880825 TFAP2A JASPAR yes 27441293
Genes associated with rs2811936[chr1:23880822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More