EnhancerDB
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  3. rs28367977[chr1:21585904]
Enhancers that have rs28367977[chr1:21585904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs28367977[chr1:21585904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21585887 21585906 RFX2 JASPAR yes 27287868
chr1 21585898 21585907 SNAI2 JASPAR yes 27287869
chr1 21585898 21585908 FIGLA JASPAR yes 27287870
chr1 21585898 21585908 ID4 JASPAR yes 27287871
chr1 21585898 21585908 TCF3 JASPAR yes 27287872
chr1 21585898 21585908 TCF4 JASPAR yes 27287873
chr1 21585900 21585909 ZEB1 JASPAR yes 27287874
chr1 21585901 21585909 TBX5 JASPAR yes 27287875
Genes associated with rs28367977[chr1:21585904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More