EnhancerDB
  1. Home
  2. SNP
  3. rs28370004[chr1:223899582]
Enhancers that have rs28370004[chr1:223899582]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28370004[chr1:223899582]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223899569 223899582 ZBTB18 JASPAR yes 35671213
chr1 223899570 223899582 PKNOX1 JASPAR yes 35671214
chr1 223899570 223899582 TGIF1 JASPAR yes 35671215
chr1 223899573 223899582 ZEB1 JASPAR yes 35671221
chr1 223899573 223899583 TBX21 JASPAR yes 35671222
chr1 223899573 223899584 TBX20 JASPAR yes 35671223
chr1 223899573 223899584 TBX2 JASPAR yes 35671224
chr1 223899573 223899586 EOMES JASPAR yes 35671225
chr1 223899574 223899582 MGA JASPAR yes 35671226
chr1 223899574 223899582 TBX15 JASPAR yes 35671227
chr1 223899574 223899582 TBX1 JASPAR yes 35671228
chr1 223899574 223899582 TBX4 JASPAR yes 35671229
chr1 223899574 223899582 TBX5 JASPAR yes 35671230
chr1 223899574 223899584 TBR1 JASPAR yes 35671231
Genes associated with rs28370004[chr1:223899582], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More