EnhancerDB
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  3. rs28370012[chr1:223902973]
Enhancers that have rs28370012[chr1:223902973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28370012[chr1:223902973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223902528 223903104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383862
chr1 223902528 223903104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873042
chr1 223902588 223903301 ZNF263 UCSC Txn Factor no Conserved 107873043
chr1 223902874 223903230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383863
chr1 223902874 223903230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873044
chr1 223902889 223903285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383864
chr1 223902889 223903285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873045
chr1 223902896 223903556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383865
chr1 223902896 223903556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873046
chr1 223902899 223903355 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383866
chr1 223902899 223903355 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873047
chr1 223902920 223903330 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107873048
chr1 223902925 223903369 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21383867
chr1 223902925 223903369 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107873049
chr1 223902935 223903275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383868
chr1 223902935 223903275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873050
chr1 223902939 223903240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383869
chr1 223902939 223903240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873051
chr1 223902942 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383870
chr1 223902942 223903406 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873052
chr1 223902949 223903405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383871
chr1 223902949 223903405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873053
chr1 223902951 223903347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383872
chr1 223902951 223903347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873054
chr1 223902956 223903360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383873
chr1 223902956 223903360 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873055
chr1 223902959 223903319 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383874
chr1 223902959 223903319 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873056
chr1 223902964 223903244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21383875
chr1 223902964 223903244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873057
chr1 223902967 223903287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21383876
chr1 223902967 223903287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873058
chr1 223902968 223902973 ETS2 TRANSFAC yes 35671545
chr1 223902971 223903347 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21383877
chr1 223902971 223903347 TCF7L2 UCSC Txn Factor no Conserved 107873059
chr1 223902971 223903347 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107873060
Genes associated with rs28370012[chr1:223902973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More