EnhancerDB
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  3. rs28370018[chr1:223904277]
Enhancers that have rs28370018[chr1:223904277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28370018[chr1:223904277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223904015 223904371 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21383914
chr1 223904015 223904371 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107873103
chr1 223904267 223904637 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21383915
chr1 223904267 223904637 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873104
Genes associated with rs28370018[chr1:223904277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More