EnhancerDB
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  3. rs28370023[chr1:223906211]
Enhancers that have rs28370023[chr1:223906211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28370023[chr1:223906211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223906199 223906211 POU2F1 JASPAR yes 35671987
chr1 223906200 223906212 POU3F2 JASPAR yes 35671988
chr1 223906200 223906213 POU2F2 JASPAR yes 35671989
chr1 223906203 223906214 NFKB1 JASPAR yes 35671990
chr1 223906204 223906214 NFKB1 JASPAR yes 35671991
chr1 223906204 223906214 REL JASPAR yes 35671992
chr1 223906204 223906217 HSF1 JASPAR yes 35671993
Genes associated with rs28370023[chr1:223906211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More