EnhancerDB
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  3. rs28370377[chr1:52024966]
Enhancers that have rs28370377[chr1:52024966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs28370377[chr1:52024966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52024951 52024971 RREB1 JASPAR yes 28850586
chr1 52024952 52024972 RREB1 JASPAR yes 28850587
chr1 52024953 52024973 RREB1 JASPAR yes 28850588
chr1 52024956 52024966 ZNF740 JASPAR yes 28850589
chr1 52024957 52024977 RREB1 JASPAR yes 28850590
chr1 52024958 52024968 ZNF740 JASPAR yes 28850591
chr1 52024958 52024978 RREB1 JASPAR yes 28850592
chr1 52024959 52024979 RREB1 JASPAR yes 28850593
chr1 52024960 52024970 SP1 JASPAR yes 28850594
chr1 52024960 52024981 ZNF263 JASPAR yes 28850595
chr1 52024962 52024982 RREB1 JASPAR yes 28850596
chr1 52024963 52024968 SP1 TRANSFAC yes 28850597
chr1 52024963 52024975 ZBTB7B JASPAR yes 28850598
chr1 52024963 52024975 ZBTB7C JASPAR yes 28850599
chr1 52024966 52024980 PLAG1 JASPAR yes 28850600
chr1 52024966 52024987 ZNF263 JASPAR yes 28850601
Genes associated with rs28370377[chr1:52024966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More