EnhancerDB
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  3. rs28371998[chr15:40367120]
Enhancers that have rs28371998[chr15:40367120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28371998[chr15:40367120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40366605 40367313 ZBTB33 GTRD no Brain (SK-N-SH) 21649884
chr15 40366676 40367239 ZBTB33 GTRD no Brain (SK-N-SH) 21649887
chr15 40366720 40368771 TCF7L2 GTRD no Colon (HCT116) 21649888
chr15 40366783 40369415 TCF7L2 GTRD no Colon (HCT116) 21649889
chr15 40366811 40368964 TCF7L2 GTRD no Colon (HCT116) 21649890
chr15 40366839 40368087 AR GTRD no Prostate (PC-3) 21649891
chr15 40366846 40368701 TCF7L2 GTRD no Colon (HCT116) 21649892
chr15 40366929 40369193 ZNF274 GTRD no Bone Marrow (K562) 21649893
chr15 40366947 40369135 ZNF274 GTRD no Bone Marrow (K562) 21649894
chr15 40367058 40367372 ZNF274 GTRD no Bone Marrow (K562) 21649895
chr15 40367113 40367125 TFAP2A JASPAR yes 22926843
chr15 40367113 40367125 TFAP2C JASPAR yes 22926844
chr15 40367113 40367128 TFAP2C JASPAR yes 22926845
chr15 40367114 40367129 ZIC3 JASPAR yes 22926846
chr15 40367117 40367128 E2F4 JASPAR yes 22926847
Genes associated with rs28371998[chr15:40367120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More