EnhancerDB
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  3. rs28377214[chr1:1610480]
Enhancers that have rs28377214[chr1:1610480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28377214[chr1:1610480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1610478 1610493 HNF4A JASPAR yes 26197922
chr1 1610479 1610493 RXRB JASPAR yes 26197923
chr1 1610479 1610493 RXRG JASPAR yes 26197924
chr1 1610479 1610494 HNF4G JASPAR yes 26197925
chr1 1610479 1610494 NR2C2 JASPAR yes 26197926
Genes associated with rs28377214[chr1:1610480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More