EnhancerDB
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  3. rs28391220[chr17:10031823]
Enhancers that have rs28391220[chr17:10031823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs28391220[chr17:10031823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10031818 10031833 NR2C2 JASPAR yes 53090576
chr17 10031818 10031838 RREB1 JASPAR yes 53090577
chr17 10031819 10031833 PLAG1 JASPAR yes 53090578
Genes associated with rs28391220[chr17:10031823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More