EnhancerDB
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  3. rs28392916[chr12:123603903]
Enhancers that have rs28392916[chr12:123603903]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123594465 123621595 enh15080
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28392916[chr12:123603903]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123603896 123603917 IRF1 JASPAR yes 124320423
chr12 123603897 123603918 IRF1 JASPAR yes 124320424
chr12 123603899 123603920 IRF1 JASPAR yes 124320425
chr12 123603900 123603921 IRF1 JASPAR yes 124320426
chr12 123603901 123603916 FOXP1 JASPAR yes 124320427
chr12 123603901 123603922 IRF1 JASPAR yes 124320428
chr12 123603902 123603917 FOXP1 JASPAR yes 124320429
chr12 123603902 123603923 IRF1 JASPAR yes 124320430
chr12 123603903 123603918 FOXP1 JASPAR yes 124320431
Genes associated with rs28392916[chr12:123603903], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More